Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTKGGQTWARRALLLGILWATAHLPLSGTSLPQRLPRATGNSTQCVISPSSEFPEGFFTRQERRDGGIIIYFLIIVYMFMAISIVCDEYFLPSLEIISESLGLSQDVAGTTFMAA-GSSAPELVTAFLGVFITKGDIGISTILGSAIYNLLGICAACGLLSNTVSTLSCWPLFRDCAAYTISAAAVLGIIYDNQVYWYEGALLLLIYGLYVLVLCFDIKINQYIIKKCSPCCACLAKAMERSEQQPLMGWEDEGQPFIRRQSRTDSGIFYEDSGYSQLSISLHGLSQVSEDPPSVFNMPEADLKRIFWVLSLPIITLLFLTTPDC-RKKFWKNYFVITFFMSAIWISAFTYILVWMVTITGETLEIPDTVMGLTLLAAGTSIPDTIASVLVARKGKGDMAMSNIVGSNVFDMLCLGIPWFIKTAFINGSAPAEVNSRGLTYITISLNISIIFLFLAVHFNGWKLDRKLGIVCLLSYLGLATLSVLYELGIIGNNKIRGCGG |
4CZB Chain:A ((1-415)) | MELMMAIGYLGLALVLGSLVAKIAEKLKIPDIPLLLLLGLIIGPFLQIIPSDSAMEIF-----EYAGPIGLIFILLGGAFTMRISLLKRVIKTVVRLDTITFLITLLISGFIFNMVLNLPYTSPVGYLFGAITAATDPA----------TLIPVFSRVRTNPEVAITLEAESIFNDPLGI-VSTSVILGL-FGLFSSSNPLIDLITLAGGAIVVGLLLAKIYEKIIIHCD-----FHEYVAPLVLGGAMLLLYVGDDLLPSICG------YGFSGYMAVAIMGLYLGDALFRADDI---DYKYIVSFCDDLSLLARVFIFVFLGACIKLSMLENYFIPGLLVALGSIFLARPLGVFLG-----------------LIGSKHSFKEKLYFALEGPRGVVPAALAVTVGIEILK------------------NADKIPASITKYIT---------------------PTDIAGTIIIGTFMTILLSVILEASWAGMLALKLLGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275963 for 3704 contacts (-74.5/contact) +
2D Compatibility (PS) -41948 + (NN) -751 + (LL) 6668
1D Compatibility (HY) -23600 + (ID) 3700
Total energy: -339294.0 ( -91.60 by residue)
QMean score : 0.129
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