Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQPP-------PDEARRDMAGDTQWSRPECQAWTGTLLLGTCLLYCARSSMPICTVSMSQDFGWNKKEAGIVLSSFFWGYCLTQVVGGHLGDRIGGEKVIL-LSASAWGSITAVTPLLAHLSSAH-LAFMTF-SRILMGLLQGVYFPALTSLLSQKVRESERAFTYSIVGAGSQFGTLLTGAVGSLLLEWYGWQSIFYFSGGLTLLWVWYVYRYLLSEKDLILALGVLAQSRPVSRHNRVPWRRLFRKPAVWAAVVSQLSAACSFFILLSWL-PTFFEETFPDAKGWIFNV-VPWLVAIPASLFSGFLSDHLINQGYRAITVRKLMQGMGLGLSSVFALCLGHTSSFCESVVFASASIGLQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLGGYLMETTGSWTCLFNLVAIISNLGLCTFLVFGQAQRVDLSSTHEDL- |
| 4RAP Chain:A ((10-391)) | ITPPDTPTQAGPENIFYDFNDGARVLLPEGK-WHVRLLD-------ADSENILFCCDVDKGWVTSSKKYFVRFRIQVFRQGATPLLDETL--KLKDRPVLISFPTGTLGDLLGWFPYAERFQSLHKCRLECTMSQDIIDLLAPQY-PQIQFSTPDKPRTVAPYATYRVG---------------------------LYFGGDTNNQPVD--FRKVGFHRSAGYILGVDPREAPVRLDLSAP--RVIAAPYVCIATQSTCQAK-------YWNNGTGWSEVIAHLKSLGYRVMC---IDRDAHYGQGFVWNH-IPWGAEDFTGKLPLQERVNLLRHA-SFFIG----LPSGLSWLAWATRIPVVLISGFS--LPNSEFYTPWRVFNSHGCYGCWDDT-----SLNFDHHDFLWCPRHKNT---DRQFECTRLITGAQVNGVINKLHRSLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289398 for 2972 contacts (-97.4/contact) +
2D Compatibility (PS) -37467 + (NN) 3100 + (LL) 4932
1D Compatibility (HY) -10000 + (ID) 3600
Total energy: -332433.0 ( -111.85 by residue)
QMean score : 0.205
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