Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MPSSVTALGQARSSGPGMAPSACCCSPAALQRRLPILAWLPSYSLQWLKMDFVAGLSVGLT--AIPQALAYAEVAGLPP--QYGLYSAFM----GCFVYFF-----LGTSRDVTLGPT--------------------AIMSLLVSFYTFHEPAYAVLLAFLSGCIQLAMGVLRLGFLLDFISYPVIK-GFTSAAAVTIGFGQIKNLLGLQ--NIPRPFFLQVYHTFLRIAETRVGDA-----------VLGLVCMLLLLVLKLMRDHVPP----------VHPEMP--PGVRLSRGLVWAATTA------------RNALVVSFAALVAYSFEVTGYQPFILTGETAEGLPPVRIPPFSVTTANGTISFTEMVQDMGAGLAVVPLMGLLESIAVAKAFASQNNYRID-------ANQELLAIGLTNMLGSL------VSSYPVTGSFGRTAVNAQSGVCTPAGGLVTGVLVLL---------SLDYLTSLFYYIPKSALAAVIIMAVAPLFDTKIFRTLWRVKRLDLLPLCVTFLLCFWEV-------------------QYGIL-AGALVSLLM----LLHSAARPETKVSEGPVLVLQPASGLSFPAMEA-----LREEILSRALEVSPPRCLVLECTHVCSIDYTVVLGLGELLQDFQKQGVALAFVGLQVPVLRVLLSADLKGFQYFSTLEEAEKHLRQEPGTQPYNIREDSILDQKVALLKA |
| 4U5B Chain:A ((1-804)) | NSIQIGGLFPRGADQEYSAFRVGMVQFSTSEFRLTPHIDNLEVANSFAVTNAFCSQFS-RGVYAIFGFYDKKSVNTI-TSFCGTLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQDLELKGERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKIQFGGA-EVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELKTNGPRKIGYWS--EVDKMVVTLTEEQKTVVVTTILESPYVMMKKNHEMLEGNERYE--GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWDGMVGELVYGKADIAIAPLTITLVREEVIDFSKPF-----MSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMAIVFAYILVSVVLFLSARIVAGVWWFFTLIIISSYTANLATFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSL----GTPVNLAVLKLSE---QGVLDKLKNKWWYDKGECGASALSLSNVAGVFYILVGGLGLAMLVALIEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -326388 for 3876 contacts (-84.2/contact) +
2D Compatibility (PS) -61227 + (NN) -8644 + (LL) 1260
1D Compatibility (HY) -24000 + (ID) 5250
Total energy: -424249.0 ( -109.46 by residue)
QMean score : 0.133
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