Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGCPCPGCGMAGPRLLFLTALALELLE-----RAGGSQPALRSRGTATACRLDNKESESWGALLSGERLDTWICSLLGSLMVGLSGVFPLLVIPLEMGTMLRSEAGAWRLKQLLSFALGGLLGNVFLHLLPEAWAYTCSASPGGEGQSLQQQQQLGLWVIA--GILTFLALEKMFLDSKEEGTSQAPNKDPTAAAAALNGGHCLAQPAAEPGLGAVVRSIKVSGYLNLLANTIDNFTHGLAVAASFLVSKKIGLLTTMAILLHEIPHEVGDFAILL--RAGFDRWSAAKLQLSTALGGLLGAGFAICTQSPKGVVGCSPAAEETAAWVLPFTSGGFLYIALVNVLPDLLEEEDPWRSLQQLLLLCAGIVVMVLFSLFVD |
2IWV Chain:A ((5-281)) | -----------NDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSAGKRGTWFDR-------------PELEVHYQFLE-----------NDDFSFGLTGGFRNYGYHYVDE---------PGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAND---------------------------LNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAY-LPLTLGNHSVTPYTRIGLDRWSNWDWQDDIE-------------------REGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDS-------DKFHYAGVGVNYSF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78405 for 1824 contacts (-43.0/contact) +
2D Compatibility (PS) -27463 + (NN) 13596 + (LL) 4728
1D Compatibility (HY) -2400 + (ID) 2350
Total energy: -92294.0 ( -50.60 by residue)
QMean score : -0.083
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