Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGFKATDVPPTATVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPVRATASAQYRGVMGTILTMV-RTEGPRSLYNGLVA-----------GLQRQMS------------------FASVRIGLYDSVKQFYTKGSEHASIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAI----------------VNCAELVTYDLIK----DALLKANLMTDDLP---------------------------CHFTSAFGAGFCTTVIASPVD-------------------VVKTRYMNSALGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVT--------------YEQLKRALMAACTSREAPF- |
4LUQ Chain:A ((20-428)) | ---------HMTATSDLIESLISYSWDDWQVTRQEARRVIAAIRNDNV-PDATIAALDKSGSLIKLFQRVGPPELARSLIASIAGRTTMQRYQARNALIRSLINNPLGTQTDNWIYFPTITFFDICADLADAAGRLGFAAAGATGVASQAIQGPFSGVGATGV-NPTDLPSIAFGDQLKLLNKDPATVTKYSNPLGDLGAYLSQLSPQDKLNQAQTLVGQPISTLFPDAYPGNPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTRDEDAKDYQAAVSIKSANTSIGLGQVVVSTAIKYELFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQQDLRKLPKTRGAFPSIDLRAYAGNPRNWPRDNVRALASEYTSRPWDDNLSPGWPMFVDDAYATFLDPGMRFP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109553 for 2115 contacts (-51.8/contact) +
2D Compatibility (PS) -30536 + (NN) -2619 + (LL) 708
1D Compatibility (HY) -4000 + (ID) 2500
Total energy: -148500.0 ( -70.21 by residue)
QMean score : 0.213
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