Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MEAHNASAPFNFTLPPNFGKRPTDLALSVILVFMLFFI--MLSLGCTMEFSKIKAHLWKPK---GLAIALVAQYGIMPLTA-------FVLGKVFRLKNIEALAILVCGCSPGGNLS----NVFSLAMKGDMNLSIVMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKV-------PYKGIVISLVLVLI-----------------------PCTIGIVLKSKRP------QYMRYVIK--GGMI---IILLCSVAVTVLSAINVGKSIMFAMTPLLIATSSLMPFIGFL--------LGYVLSALFCLNGRCR----------------------RTVSMETGCQNVQLCSTILNV------AFPPEV----------------------IGPLFFFPLLYMIFQL-----GEGLLLIAIFWCYEKF--------------------------KTPKDKTKMIYTAATTEETIPGALGNGTYKG-----EDCSPCTA-------------- |
| 5BP8 Chain:A ((6-520)) | APREAEAAALLAATVADPWGLVAPSVYDTARLVSLAPWLDGHRERLGYLAKEQNQDGSWGAPDGYGLVPTLSAVEALLTELARTDSGAPHLSPDDLAAACADGLGALRDGLLAGPVPDTIGVEFVAPSLLADINTRLAALTEQAPGKLGAWSGTTLTSPAPDLDGALLAGVREMTEQAPLPEKLWHTLEAVTRDGTRGARPHEGAPPHNGSVGCSPAATAAWLGAAPDPAAPGVAYLRDVQARFGGPVPSITPIVYFEQAWVLNSLAASGLRYEAPAALLDSLEAGLTDEGIAAAPGLPSDSDDTAAVLFALAQHGRTHRPDSLMHFRRDGYFSCFGVERTPSTSTNAHILEALGHHVTVRPDDAGRYGAEIRMISDWLLDNQLPDGSWMDKWHASPYYATACCALALAEFGGPSARAAVDRAAAWALATQRADGSWGRWQGTTEETAYMVQLLMRTRTPGSPGTVARSAARGCDALLAHDDPASYPGLWHDKDIYAPVTVIRAARLAALALGGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298241 for 2650 contacts (-112.5/contact) +
2D Compatibility (PS) -35609 + (NN) -11631 + (LL) 0
1D Compatibility (HY) 17200 + (ID) 2150
Total energy: -330431.0 ( -124.69 by residue)
QMean score : 0.116
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