Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GRIPSPPSKTSLDIAEELQNDKGVSFAFQAREEELGAFTKRTLFAYSGDGLTGPFKAPASAELSSFLTAHPKGRWLIAFPLGTGI------VSVDEGILTLEISRSLPEVGSGSSFYLTEK
4ELD Chain:A ((66-110))
------------------------------------------------------------------------QHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPLMITESERIIY---
General information:
TITO was launched using:
RESULT:
Template:
4ELD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13007 for 122 contacts (-106.6/contact) +
2D Compatibility (PS) -4488 + (NN) -2483 + (LL) 3668
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -18560.0 ( -152.13 by residue)
QMean score : 0.097
(partial model without unconserved sides chains):
PDB file :
Tito_4ELD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ELD-query.scw
PDB file :
Tito_Scwrl_4ELD.pdb
: