Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | QDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNN----SIYVVANIGDKKPCDTSDPQCPPD--GRYQYNTDVVFDSQGKLVARYHKQNLFM----GENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPH-LSAVEFHSAWAMGMRVNFLASNIHY--PSKKM-TGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYASSIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSG |
| 4F4H Chain:A ((22-266)) | --------------------------------AGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPE---------DLLL---------RP-AF-YAASDAALAELAAQLKPFAGLAVLVGHPLRAP---ANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDLPNTEVFDEKRYFATDA-APYVFELNGVKFGVVICEDVWHASAAQLAK-AAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLDGAGELVAKMP--QFEEGNAIVEFDGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102790 for 1787 contacts (-57.5/contact) +
2D Compatibility (PS) -24889 + (NN) -11828 + (LL) 14208
1D Compatibility (HY) -4800 + (ID) 1950
Total energy: -132049.0 ( -73.89 by residue)
QMean score : 0.205
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