Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLNLSVDEVLTTTRSVRKRLDFDKPVPRDVLMECLELALQAPTGSNSQGWQWVFVEDAAKKKAIADVYLANARGYLSGPAPEYPDGDTRGERMGRVRDSATYLAEHMHRAPVLLIPCLKGREDESA-------------V------------------------GGVSFW--ASLFPAVWSFCLALRSRGLGSCWTTLHLLDNGEHKVADVLGIPYDEYSQGGLLPIAYTQGID---FRPAKRLPAESVTHWNGW
1ICR Chain:A ((2-216))
-----DIISVALKRHSTKAFD-ASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGN-------Y---------------------VFNERKMLDASHVVVFCAKTAMDDVWLKLVVDQEDADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGF----DAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTE---
General information:
TITO was launched using:
RESULT:
Template:
1ICR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92952 for 1245 contacts (-74.7/contact) +
2D Compatibility (PS) -19107 + (NN) -11345 + (LL) 1084
1D Compatibility (HY) -2800 + (ID) 1550
Total energy: -126670.0 ( -101.74 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_1ICR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ICR-query.scw
PDB file :
Tito_Scwrl_1ICR.pdb
: