Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYRPFGSTGVAVSALTLRLA-DNP-RLRANDWRALVFTALENGVNSFQIDGDAP--ELLKGAGEAFAS--VERHLLFLTWRLRGD-----AKQLGPHTLDALKRSAFEGLSLDYLDLLLINDPQSASLPMAFESGLQDLQKGRALRGLGVASRGDIDPG-LL------ANDLVTAVSSPYNLSSGWA-ERHRIRQASQNNFAVIGEDFWPQALREVADKAPPKPSF---------WQ--RR-----TDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVER--DLPTGVCAQIEMARFSAQEREKAARRP |
| 3LUT Chain:A ((40-354)) | ---RNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGI-PPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115798 for 2360 contacts (-49.1/contact) +
2D Compatibility (PS) -29319 + (NN) -10134 + (LL) 1652
1D Compatibility (HY) -10800 + (ID) 1900
Total energy: -166299.0 ( -70.47 by residue)
QMean score : 0.353
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