Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLYTTLLIACLAAGFTACNDDDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIHSNGKFYLLVGTSTSNRDHFYIVDAKTLYYENSAVVGANLSGLTILNEQYGLVT---GDGIRRIDLKSLNNVRIKN-ERLLCFYNSIIYNGKVLSNDTYK--DESKVKYYDVNELIAAKEGEAPAVTELDI---IQKQKINFVLAKDGNVYTLESAD----NGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVST-DGAIYKYILG-DSDSLKAPF---IAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKDGKVLHTVDCGES------VPSQILFNN |
| 2DG1 Chain:A ((46-288)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN---------LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--------ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS-DDNLYVAMY----GQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFI- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -80775 for 1755 contacts (-46.0/contact) +
2D Compatibility (PS) -23848 + (NN) -7430 + (LL) 11480
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -104423.0 ( -59.50 by residue)
QMean score : 0.195
|
|
|