Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MTPEDPEETQPLLGPPGG-----SAPRGRRVFLAAFAAALGPLSFGFALGYSSPAIPSLQRAAPPAPRLD-DAAASWFGAVVTLGAAAGGVLGG-WLVDRA-GRKLSLLLCSVPFVAGFAVITAAQDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVVGILL-AYLAGWVLEWRWLAVLGCVPPSLMLLLMCFMPETPRFLLTQHRRQE-AMAALRFLWGSEQGWEDPPIGA-EQ-SFHLALLRQPGIYKPFIIGVSLMAFQQLSGVNAVMFY-AETIFEEAK-FK--DSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLH-VKGVATGICVLTNWLMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFSVLFTLFCVPETKGKTLEQ-ITAHF-EGR |
| 4DNH Chain:A ((2-387)) | LVSIDLPIEGRLARYDLTGRPVPFNSRDAKAFSRVAFAAAHVVAD----------------PLADNDPWLAPAIDWERTLAFRHRLWDLGL---GVAESMDTAQRGMGLGWPEARELIRRSLAEARGRPDALIACGAGTDHLAPGPDVSIDDILAAYESQIEAIEAEG-----------GRIILMAS--------RALAAAAKGPEDYIRVYDRVLSQVKE-PVIIHWLGEMFDPALEGYWGNAD--------HMAAMKTCLDVLEA---HAAKVDGIKISLLS-----KEKEIVMRRQLPKGVRMYTGDDFNYAELIAG----------------DEEGHSDALLGIFDAIAPVASAALEALGSGRNGEFFELLEPTVPLSRHIFKAPTRFYKTGVVFLAYLNGLQDHF--------------VMIGGQQSA--------------RSLVHLAELFRLADKAGA----------------LADPELATARMRRVLAMHGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DNH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290007 for 3041 contacts (-95.4/contact) +
2D Compatibility (PS) -36975 + (NN) 24 + (LL) 9652
1D Compatibility (HY) 5600 + (ID) 2900
Total energy: -314606.0 ( -103.45 by residue)
QMean score : 0.203
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