Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAATASAGAGGIDGKPRTSPKSVKFLFGGLAGMGATV---FVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAFVGT-----PAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCI------PTMARAVVVNAAQLASYSQ------SKQFL---LDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQN----MRMIDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYA-RLGPHTVLTFIFLEQMNKAYKRLFLSG |
| 4LCT Chain:A ((1-318)) | ---------EPLDIEAYAALYKGRTKIMRLLFIANHCGGNHALQFDALRMAYDEIKKGENTQLFREVVNKIGNRLGEKYGM------------DLAWCEAVDRRAEQKKVKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALAS-FDRSELKQKVIDNINFRNFLELVPDVRELINDFYSS-RYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LCT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108925 for 2181 contacts (-49.9/contact) +
2D Compatibility (PS) -29109 + (NN) 291 + (LL) 1348
1D Compatibility (HY) -6800 + (ID) 1900
Total energy: -145095.0 ( -66.53 by residue)
QMean score : 0.230
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