Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------MADQPKPISPLKNLLAGGFGGVCLVFVGHP-------LDTVKVRLQTQPPSLPG-QPPMYSGT-------FDCFRK--TLFREGITGLYRGMAAPI-IGVT-------------PMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQIQASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRD---VPASGMYFMT--YEWLKNIFTPEGKRVSELSAPRILVAG--GIAGI-----FNWAVAIPPDVLKSRFQTAPPGKY-PNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLG-FEVAMKFLNWATPNL------------------------------ |
| 4WW4 Chain:A ((3-458)) | QISEVRGNTRDHRTAAHTHIKGLGLNSSGIAEKQAAGFVGQCAAREACGVVVDLIKAHKMAGRGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFRRAIGLRVRETKDVYEGEVSTLLIGLKSARGQKLDQKERVQVGDVIYIETNTGACRSDAYATEFDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDVANARPDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGVAELIPGVLFIDEAHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQ-RLLIIPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAEHGVRISLRYCLQLLAPASILARVNGRTQVDVQDIAEAEELFLDARRSANILTSTGGLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135201 for 1898 contacts (-71.2/contact) +
2D Compatibility (PS) -31177 + (NN) -7105 + (LL) -28
1D Compatibility (HY) -9200 + (ID) 2900
Total energy: -185611.0 ( -97.79 by residue)
QMean score : ?
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