Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MTQNKLKLCSKANVYTEVPDGGWGWAVAVSFFFVEVFTYGIIKTFGVFFNDLMDSFNESNSRISWIISICVFVLTFSAPL-----ATVLSNRFGHRLVVMLGGLLVSTGMVAASFSQEVSHMYVAIGIISGLGYCFSFLPTVTILSQYFGKRRSIVTAVASTGECFAVFAFAPAIMALKERIGWRYSLLFVGLLQLNIVIFGALLRPIFIRG-----PASPKIVIQENRKEAQYMLENEKTRTSIDSIDSGVELTTSPK---------------NVPTHTNLELEPKADMQQVLVKTSPRPSEKKAPLLDFSILKEKSFICYALFGLFATLGFFAPSLYIIPLGISLGIDQDRAAFLLSTMAIAEVFGRIGAGFVLNREPIR----KIYIELICVILLTVSLFAFTFATEFWGLMSC------------------------SIFFGFMVGTIGGTHIP------------------------LLAEDDVVGIEKMSSAAGVYIFIQSIAGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKMGLCQHHH-------------SGETKVVSHRGKTLQDIPEDFLEMD------LAKNEHRVHVQMEPV----------- |
| 1B25 Chain:A ((1-619)) | MYGWWGRILRVNLTTGEVKVQEYPEEVAKKFIGGRGLAAWILWNEAR-GVEPLSPENKLIFAAGPFNGLP-------TPSGGKLVVAAKSPLTGGYGDGNLGTMASVHLRRAGYDALVVEGKAKKPVYIYIEDDNVSILSAEGL-WGKTTFETERELKEIHG-KNVGVLTIGPAGENLVKYA---VVISQEGRAAGRPG--------MGAVMGSKKLKAVVIRGTKEIPVADKEELKKLSQEAYNEILNSPG-YPFWKRQGTMAAVEWCNTNYALPTRNFSDGYFEFARSIDGYTMEGM-KVQQRGCPYCNMPCGNVVLDAEGQESEL-DYENVALLGSNLGIGKLNEVSVLNRIADEMGMDTISLGVSIAHVMEAVERGILK-------EGPTFGDFKGAKQLALDIAYRKGELGNLAAEGVKAMAEKLGTHDFAMHVKGLEVSGYNCYIYPAMALAYGTSAIGAHHKEAWVIAWEIGTAPIEYKISYDPIKAQKVVELQRLRGGLFEMLTACRLPWVEVGLSLDYYPKLLKAITGVTYTWDDLYKAADRVYSLIRAYWVREFNGKWDRKMDYPPKRWFTEGLKSGPHKGEHLDEKKYDELLSEYYRIRGWDERGIPKKETLKELDLDFVIPELEKVTNLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1B25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -401031 for 4446 contacts (-90.2/contact) +
2D Compatibility (PS) -51245 + (NN) -2566 + (LL) 2244
1D Compatibility (HY) 5600 + (ID) 3500
Total energy: -450498.0 ( -101.33 by residue)
QMean score : 0.201
|
|
|