Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MPSSVTALGQARSSGPGMAPSA-----------CCCSPAALQRRLPILAWLP--------SYSLQWLKMDF----------------VAGLSVGLTAIPQALAYAEVAGLPPQYGLYSAFMGCFVYFFLGTSRDVTLGPTAIMSLLVSFYTFHEPAYAVLLAFLSG--CIQLAMGVLRLGFLLDFISYPVI----KGFTSAAAVTIGFGQIKNLLGLQNIPRPFFL---QVYHTFLRIAETRVGDAVLGLVC----MLLLLVLKLMRDHVPPVH--PEMPPGVRLSRGLVWAATTAR-------NALVVSFAALVAYSFE-VTGYQPFILTGETAEGLPPVRIPPFSVTTANG-------------------TISFTEMVQDMG------AGLAVVPLMGLLESIAVAKAFASQNNYR------IDANQELLAIGLTNMLGSLVSSYPVTGSFGRTAVNAQSGVCTPAGGLVTGVLVLLSLDYLTSLF---YYIPKSALAAVIIMAVAPLFDTKIFRTLWRVKR-------LDLLPLCV-----------TFLLCFWE--------------VQYGILAGAL--------------VSLLMLLHSAARPETKVSEGPVLVLQPASGLSFPAMEALREE--ILSRALEVSPPRCLVLECTHVCS-IDYTVVLGLGELLQDFQK-----QGVALAFVGLQVPVLRVLLSADLKGFQYFSTLEEAEKHLRQEPGTQPYNIRE-----DSILDQKVALLKA------------ |
| 5AGA Chain:A ((3-827)) | DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLE-GKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHR------GYLLELLLTKICYITRKSASCQADSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQASECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTFLAAS-----MGAIEACVMWLLENEFIQSTEEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSARKEAVEERRNMRTIWVTGRKGLTEREAAALIVEEARMILQQDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -439935 for 4389 contacts (-100.2/contact) +
2D Compatibility (PS) -61916 + (NN) -10936 + (LL) -8
1D Compatibility (HY) -26400 + (ID) 5400
Total energy: -544595.0 ( -124.08 by residue)
QMean score : 0.170
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