Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRAGDHNRQRGCCGSLADYLTSAKFLLYLGHSLSTWGDRMWHFAVSVFLVEL-YGNSLLLTAVYGLVVAGSVLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKHELLTMYHGWV--LTSCYILIITIANIANLASTATAITI------QRDWIVVVAGEDRSKLANMNATIRRIDQLTNILAPMAVGQIMTFGSP-------VIGCGF-ISGWNLVSMCVEYVLLWK-VYQKTPALAVKAGLK-EEETELKQLNLHKDTEPKPLEGTHLMGVKDSNIHELEHEQEPTCASQMAEPFRTFRDGWV----SYYNQPVFLAGMGLAFLYMTVLGFDCITTGYAYTQGLSGSILS--------------------------ILMGASAITGIMGTVAFTWLRRKCG--LVRTG----LISGLAQLSCL----ILCVISVFMPGSPLDLSVSPFEDIRSRFIQGESITPTKIPEITTEIYMSNGSNSANIVPETSPESVPIISVSLLFAG--VIAARIG-LWSF-----DLTVTQLLQENVIESERG--IINGVQNSMNYLL--DLLHFIMVILAPNPEAFGLLVLISVSFVAMGHIMYFRFAQN-----TLG-NKLFACGPDAKEVRKENQANTSVV |
| 2QUB Chain:A ((1-615)) | --------SHMGIFSYKDLDENASKALFSDALAISTYAYHNIDNGFDEGYHQTGFGLGLPLTLITALI--GSTQSQGGLPGLPWNPDSE-QAAQEAVNNAGWSVIS---ATQLGYAGKTDARGTYYGETAGYTTAQAEVLGKYDSEG-NLTAIGISFRGTSGPRESLIGDTIGDVINDLLAGFGPKGYADGYTLKAFGNLLGDVAKFAQAHGLSGEDVVVSGHSLGGLAVNSMAAQSDANWGGFYAQSNYVAFASPTQYEAGGKVINIGYENDPVFRALDGTSL-TLPSLGVHDAPHTSATNNIVNFNDHYAS--DAWNLLPFSILNIPTWLSH--LPFFYQDGLMRVLNSEFYSLTDKDSTIIVSNLSNVTRGNTWVEDLNRNAETHSGPTFIIGSDGNDLIKGGKGNDYLEGRDGDDIFRDAGGYNLIAGGKGHNIFDTQQALKNTEVAYDGNTLYLR-----DAKGGITLADDISTLRSKETSWLIFNKEVDHQVTAAGLKSDSGLKAYAAATGGDGDDVLQARSHDAWLFGNAGNDTLIGHAGGNLTFVGGSGDDILKGVGNGNTFLFSGDFGRDQLYGFNAS----DKLVFIGTEG-ASGNIRDYATQQNDDLVLAFGHSQVTLIGVSLDHISTDQ---VVLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -326370 for 4304 contacts (-75.8/contact) +
2D Compatibility (PS) -55004 + (NN) 5935 + (LL) 2348
1D Compatibility (HY) -3200 + (ID) 5350
Total energy: -381641.0 ( -88.67 by residue)
QMean score : 0.106
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