Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMKLARKSVPFIIAVALLAACLLAVGLSPLVLPDYKGTIEEREQPQNFNLLYLNSGEELNLYPWNLYTGQEQELFEEEIVSFAANSVR-ILGGGSWTDEEL------------YPLIKFRYSGQDLRFLKDMALTE----KDG--RRYLVNMALDPNGLCYFSYVNQDEREATADEMDQALGKLQEDWEKFLSDPLPADSEVDLYEEKPSGSYQLDDGELKTDNAFYMFFMRCQMLSDQMRKEQYSDYIGDNLYTIWELVLKSEFTSLSYDNHIYAMYSNDGGTSMVLIYSPIEERFVGFSLKY |
2XHF Chain:A ((77-190)) | --------------------------------------------------------------AFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDPEHKIRML----ADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVSTEPDITGLACLLSIQRQ--------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1414 for 590 contacts (-2.4/contact) +
2D Compatibility (PS) -10421 + (NN) -5629 + (LL) 12884
1D Compatibility (HY) 800 + (ID) 450
Total energy: -4230.0 ( -7.17 by residue)
QMean score : 0.083
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