Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKTNKIIFIVFIVIFIGLSYRHFTNTDKARMEISSLSSIDVFKFNSFSK--FSNDKIGVIYDEEKLSKFKVIMNSLDTSEGIKKIEVPKDANIESFKYSYHIQPNLKYVEDNNVYDGYFLLYILVGDSEGKSYIIFSGTELSYVLDKNNTNILKEIFLNVKKQQ |
4DUN Chain:A ((3-32)) | --------------------------------------AMEYYIVDSFATKLFKGNPAGVCVLDRRIP------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DUN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157 for 106 contacts (-1.5/contact) +
2D Compatibility (PS) -2916 + (NN) 99 + (LL) 9816
1D Compatibility (HY) -3600 + (ID) 250
Total energy: 2992.0 ( 28.23 by residue)
QMean score : 0.059
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