Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYL-FNYVAVNWAGTRT--GGD-F--YIPLSMSSQCQVDGGLDYG-GWDESVYTISPYSTGNTWK--HYYSVGGNNLMLAIKNAEEADPVNHNAIAQCKILLAEHMYEATMLWGDIPFTESWNGTIKYPKFDSQESVLNGVLSLLDEALQIMDLND-ANAIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVDKDPSKATAIGTLLQAG---GMVSSASDNLVFPYSAEPGNQNPKYELIELV-----------GGTQILFFASNYMLKPMQERNDPRIPCYFEPGADG--VYRGLGNREPAVTDDKDNMLSSVVSSYLFRKDAPELIYSCQEQLLLEAEA-YARGLGVAQNLSKANELYKKGIREACAFYGVAEADIDTYVTGL---P----------------------ELTALTQEKALYEIHMQQWIDLMDRPFEEFVQWRRSGTAGNEVPTLQVPE-DATSKELIRRWEYSPEEMTANINAPKE--------SPKIWEKLWFDL |
| 3CGH Chain:A ((10-514)) | --------------------------------PYEAPDLSADGYALGSAMNNLAGCVVSPDVNTAQFTDCLLGGPLGGYFADSNAGFTETISNFNPKDDWSRVFLKSDKIIPTLYSNLTQVKLVSQNTN--DPVPYAIAQVIKVAAMHRVTDAFGPIPYSQIGANGEIATPYDSQEVTYNTFFDELNAAIATLNENSNEQLVPTADYIYKGDVKKWIRFANSLKLRLAIRIAYANPVKAQQMAEEAVNPANGGVIESNADNATWNYFE--TSQNPIYVATRYNQVQTSDHGGVPCLTGGDTHAAADIICYMNGYKDNRREKFFTKSEWAGQDYVGMRRGIVIPELK---TTGHKYSGVNIAPTSPLYWMNAAEVAFLRAEGQAVFNFSMG---GTAESFYNQGIRLSFEQWGADG--VEDYLKDDVNKPTAYTDPAGTNTYQNALSNITIKWNDSADKEEKQERIIVQKWIANWQLGNEAWADFRRTGYPKLIPVKENKSGGVVDSEKGARRMPYPLDEFVSNKANVEYAIANYLHGADNMATDVWWAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81629 for 3929 contacts (-20.8/contact) +
2D Compatibility (PS) -47031 + (NN) -21309 + (LL) 2816
1D Compatibility (HY) -2800 + (ID) 4350
Total energy: -154303.0 ( -39.27 by residue)
QMean score : 0.356
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