Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDTQQLYFLNDIGKQKPESIRNRSAACPFCD---RENLTDILATEGSIIWLKNKFPTLKDTFQTVLIETDNCEDHIATYTEEHMRSLIRFSIKHWLNLQKNEEFTSVILYKNHGPFSGGSLHHAHMQIIGMKYVNYLDNVEQDNFQGVIVQKNEHIELNISDRPIIGFTEFNIIIEDIGCIDELANYIQQTVRYILTDFHKGCSSYNLFFYYLNEKIICKVVPRFVVSPLYVGYKIPQVSTKIEDVKIQLAAYFTKQNDAIIHKKIE |
2EO4 Chain:A ((1-143)) | --------------------------CTFCSIINRELEGYFVYEDEKFAAILDKYPVSL--GH-TLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLRLLTNIGRSAGQVIFHLHVHIIPTWEGDYP------DIFK----------------SFKPRK-----EQEKEYYELLQKIIRESIENLKRKI-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52468 for 1021 contacts (-51.4/contact) +
2D Compatibility (PS) -14953 + (NN) -5730 + (LL) 9440
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -68811.0 ( -67.40 by residue)
QMean score : 0.163
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