Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GALTAQGASFFTAAPLSYNTGNSTISLDYRSPQLRVSGGALALTSPVFVYQTPFNTPMRLRNGTYNEYADAHIQMVRFGTTVLFNIDV---TGE-TNATGTQTWELQFDGTLGSCLTGRMQVMGGTGEELDVTPTFILPTSDKSVYKQGFMPIVCSENGEFKQSTYCSYALTYRLGNFYITLKSTTSGCKPIFQMSFMYESQIGIV
2HFT Chain:? ((107-218))
------------------NLGQPT--IQ----SFEQVGTKVNVTV-----EDER-TLVR-RNNTFLSLRDV------FGKDLIYTLYYWKSSGKKTAKTNTNEFLIDVD----------------KGENYCFSVQAVIP-SRTVNRKSTDSPVECMG-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25755 for 626 contacts (-41.1/contact) +
2D Compatibility (PS) -10746 + (NN) -3641 + (LL) 6408
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -40584.0 ( -64.83 by residue)
QMean score : 0.159
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: