Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLLCLLALLLCTTVFAQPQQVVVGVSGNGYVTRQQDGARITQRGVTHWTNPKSIVSIYFYLHQPTTADLSLYAK----GHSEIKVSYGKKGF-KVNLQSND----FTKVPVGSIDIRQAGYVRIDLQGVSKSGEGFGEIKQLIADNVTGKSNYVKDFSDYWGRRGPSVHLGYALPEGDTEWFYNEITVPKEGETMHSYYMAAGFGEGYFGMQYNSPTERRILFSVWSPFDTQNPKEIPDDQKIKLLRQGKDVHIGEFGNEGSGGQSYLKYPWKAGNTYKFLMQIRPDGNGNTTYTAYFYATDEKEWKLIASFLRPKTNTWYKRPHSFLENFSPEQGYLSREVFFGNQWARSKEGKWSRLTDATFTHDATASAQVRLDYQGGNTKDNRFYLKMGGFFNESVPMGTKFYCKPTGKEPEIDWEALKQL |
| 3WNO Chain:A ((412-512)) | ----------------------------------------------VDQFASTGDKVSFAINAPEAGDYSLVFRYGNNTGANSTLNLYVDGNFVQKLYFFNQSSWGTWKHDAWYQVPLT-QGAHTVELRYESGN-VGAVNLDSLTLGTF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WNO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44336 for 598 contacts (-74.1/contact) +
2D Compatibility (PS) -9705 + (NN) -402 + (LL) 16152
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -43241.0 ( -72.31 by residue)
QMean score : 0.096
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