Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MIT---YKKLLDELKKEIGPIAKIFLNKAMESLGYDDVDDSNYKEILSVLKMNKELREYVEIVEERLEKEG------
1GRJ Chain:? ((2-79))
QAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKEN--AEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTK
General information:
TITO was launched using:
RESULT:
Template:
1GRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13137 for 372 contacts (-35.3/contact) +
2D Compatibility (PS) -7824 + (NN) -9503 + (LL) 12
1D Compatibility (HY) 1600 + (ID) 500
Total energy: -29352.0 ( -78.90 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_1GRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GRJ-query.scw
PDB file :
Tito_Scwrl_1GRJ.pdb
: