Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSLVKIMGSFLALSLIMIFSSCIVNEHVDEGNIKENAVRMMECIVNKDSEKLFDFYNKDMKDNYKDS---S--LDEIRQLFEYIDGAITSYNYEGKGGGQEAKNDGIICYYSCHPEFDFTTETGQEYTISFSYHYIWNEHPEYEGINMIQICKDGNWGEKLIIGRNYYKE |
| 4LMI Chain:A ((3-63)) | --------------------------AMTDTEQTRALARKYFDTLNGRAWEEFAALLAEDVRYELPQTSERITGRADYLRFNQEYPG------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6822 for 254 contacts (-26.9/contact) +
2D Compatibility (PS) -6099 + (NN) -3739 + (LL) 6488
1D Compatibility (HY) -800 + (ID) 250
Total energy: -11222.0 ( -44.18 by residue)
QMean score : 0.153
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