Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAFSRFTPLIQSLPASVPFVGPEALERQHGRKIAARIGANESGFGPAPSVLLAIRQAA--GDTWKYADPENHDLKQALARHLGTSPA-NIAIGEGIDGLLGQIVRLVVEAGAPVVTSLGGYPTFNYHVAGHGGRLVTVPYA-DDREDLEGLLAAVGRENAPLVYLANPDNPMGSWWPAERVVAFAQALPE---TTLLVLDEAYCETAPRDALPPIESLIDKPNVIRARTFSKAYGLAGARIGYTLSTPGTAQAFDKIRNHFGMSRIGVAAAIAALADQDYLKEVTLKIANSRQRIGRIAADS-GLAPLPSATNFVAVDCGKDASYARAIVDRLMSDHGIFIRMPGVAP--LNRCIRISTAPDAEMDLLAAALPEVIRSLAAT |
| 3EUC Chain:A ((13-366)) | -----IIRDDVRAMGAYHVPD---------S-HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE---SWMSRLTDFGNLLVMRTVSK-LGLAGIRLGYVAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVPD-A---AQ-TFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEAFAASLQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182962 for 2804 contacts (-65.3/contact) +
2D Compatibility (PS) -38748 + (NN) -31728 + (LL) 2220
1D Compatibility (HY) -18000 + (ID) 4100
Total energy: -273318.0 ( -97.47 by residue)
QMean score : 0.480
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