Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MG-PVAGNYVHDFTANGTSSSFYTIAGNLSTSKGTATYNGK--TLTQCLKMETATSISFTAPSAGKLTLVFAEAAATAKVDGNKVTASNGIITVDL------AQGAHTITKADACNLFYMEYAAHHHHHH
2HFT Chain:? ((107-218))
NLGQPT----IQSFEQVGT-----KVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWK-SSGKKTAKTNTNEFLIDVDKG----ENYCFSVQAVIPSRTVNRKSTDSPVECMG--------------
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43021 for 574 contacts (-74.9/contact) +
2D Compatibility (PS) -9795 + (NN) 578 + (LL) 1792
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -53646.0 ( -93.46 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: