Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSS---DIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQGDTKMSDTDPEDYSEKLQGSTINADKSVEGN--LFFVVDKGK-----QYELNYTPESYGDKKPKSVTF-KIDGKDKK--ILATADKLQDSAKALSAY-VDVLLFGKDNADFEKITGANKNEIVNDFNESAKDG--YLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSI-----SKDEAIVEATVKPVDASSLSDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE |
| 1EGA Chain:A ((4-295)) | ---DKSYCGFIAIV---------G-RPNVG-------KSTLLNKLLGQKISITSRK------AQTTRHR-----IVGIHTEGAYQAIYV---------DT--PGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREG---KAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAE------------TGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLIL-VEREGQKKMVIG--NKG-------------AKIKTIGIEARKDMQEMFEAP-VHLELWVKVKSGW--ADDERALRSL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 71522 for 1975 contacts (36.2/contact) +
2D Compatibility (PS) -28898 + (NN) -3641 + (LL) 6264
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: 35797.0 ( 18.13 by residue)
QMean score : 0.216
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