Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MARGLPTIASLARLCQKLNRLKPLEDSTMETSLRRCLSTLDLTLLGVGGMVGSGLYVLTGAVAKEVAGPAVLLSFGVAAVASLLAALCYAEFGARVPRTGSAYLFTYVSMGELWAFLIGWNVLLEYIIGGAAVARAWSGYLDSMFSHSIRNFTETHVGSWQVPLLGHYPDFLAAGIILLASAFVSCGARVSSWLNHTFSAISLLVILFIVILGFILAQPHNWSADEGGFAPFGFSGVMAGTASCFYAFVGFDVIAASSEEAQNPRRSVPLAIAISLAIAAGAYILVSTVLTLMVPWHSLDPDSALADAFYQRGYRWAGFIVAAGSICAMNTVLLSLLFSLPRIVYAMAADGLFFQVFAHVHPRTQVPVAGTLAFGLLTAFLALLLDLESLVQFLSLGTLLAYTFVATSIIVLRFQKSSPPSSPGPASPGPLTKQQSSFSDHLQLVGTVHASVPEPGELKPALRPYLGFLDGYSPGAVVTWALGVMLASAITIGCVLVFGNSTLHLPHWGYILLLLLTSVMFLLSLLVLGAHQQQYREDLFQIPMVPLIPALSIVLNICLMLKLSYLTWVRFSIWLLMGLAVYFGYGIRHSKENQRELPGLNSTHYVVFPRGSLEETVQAMQPPSQAPAQDPGHME |
4DJK Chain:A ((12-501)) | ------------------------QLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLCAAEMAT-----------------VDGWGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKW---------------PALNEDPITKTIAALIILWALALTQFG----GTKYTARIAKVGFFAGILLPAFILIALAAIYLHTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEIN--------------------LSAG---------------------VMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWI--------------------------------------VGPSRGMYVTAQKNLLPAAFAKMNK----------------------NGVPVTLVISQLVITSIALIILT---NTGGG-----NNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPG-----------GKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHFFLHPRARSP---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -369838 for 4078 contacts (-90.7/contact) +
2D Compatibility (PS) -46518 + (NN) -18295 + (LL) 14944
1D Compatibility (HY) -19200 + (ID) 3250
Total energy: -442157.0 ( -108.42 by residue)
QMean score : 0.283
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