Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MAAQGYGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDDLGFITSSQSAAYAISKFVSGVLSDQMSARWLFSSGLLLVGLVNIFFAWSSTVPVFAALWF---------LNGLAQGLGWPPCGKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVSFLCLLLIHNEPADVGLRNLDPMPSEG-KKGSLKEESTLQE----LLLSP---YLWVLSTG-----------YLVVFGVKTCCTDWGQFFLIQEKGQSALVGSS--------YMSALEVGGLVGSIAAGYLSDRAMAKAGLSNYGNPRHGLL--LFMMAGMTVSMYLFRVTVTSDSPKLWILVLGAVFGFSSY--GPIALFGVIANESAPPNLCGTSHAIV--GLMANVGGFLA--GLPFSTIAKHYS-WSTAFWVAE----VICAASTAAFF-LLRNIRTKMGRVSKKAE------- |
| 5D2E Chain:A ((5-510)) | TMQIEQIVKKVKECSLTPEEGLELIKSLGKTHLYEMVWDRHEFKGS---KKFPHTKEPILFFCEDDSMYTVMKRQLEGYEAPFIYVTSGERFEDCRNGRFTMNFTKGEDYDALCGVLRSQNIRPRHIIHFLAAGL-FKNTEDAMRKQLNKS-LYSLFQMFQAFMA--NKLCP--KAEILYLYENAEG-EVQPIYNAVESFLKTVQAENPNFTCKAAELKSMFDEPFTKQHIADVISFEWNNCFTCYEPRHYYKRQLQRVKKSFSVKKNGVYLITGGAGGLGYLFAEYLAKQAEVKLILTGRSPASRETAQKLSALENLGAEALYVPADISKEKETDA-LIKYIKQTFGELNGILHSAGLVKDAFIIKKTKESIEEVIAPKVFGTVWLDKAAEEEPLDFFVMFSSLSAVLPNAGQSDYAFANGCMDGFTQYRSMKGRPGKTLSINWPLWDAGALRHAGLELLSAQAGLAAFQDSMSRSASQLAVISGDKDRISELLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 5D2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -305487 for 3399 contacts (-89.9/contact) +
2D Compatibility (PS) -43331 + (NN) -2938 + (LL) 992
1D Compatibility (HY) -8400 + (ID) 3800
Total energy: -362964.0 ( -106.79 by residue)
QMean score : 0.166
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