Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGHSPPVLPLCASVSLLGGLTFGYELAVISGALLPLQLD-FGLSCLEQEFLVGSLLLGALLASLVGGFLIDCYGRKQAILG---SNLVLLAGSLTLGLAGS-LAWLVLGRAVVGFAISL----SSMACCIYVSELVGPRQRGVLVSLYEAGITVGILLSYALNYALAGTPWGWRHMFGWATAPAVLQSLSLLFLPAGTDETATHKDLIPLQGGEAPKLGPGRPRYSFLDLFRARDNMRGRTTVGLGLVLFQQLTGQPNVLCYASTIFSS----VGFHGGSSAVLASVGLGAVKVAATLTAMGLVDRAGRRALLLAGCALMALSVSGIGLVSFAVPMDSGPSCLAVPNATGQTGLPGDSGLLQDSSLPPIPRTNEDQREPILSTAKKTKPHPRSGDPSAPPRLALSSALPGPPLPARGHALLRWTALLCLMVFVSAFSFGFGPVTWLVLSEIYPVEIRGRAFAFC-NSFNWAANLFISLSFLDLIGTIGLSWTFLLYGLTAVLGLGFIYLFVPETKGQSLAEIDQQFQKRRFTLSFGHRQNSTGIPYSRIEISAAS |
| 2CFQ Chain:A ((9-397)) | -----------FWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR--RSNFEFGRARMFGCVGWALGASIVGIMFT--INNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVG-A------NHSAFSLKLALELFRQ-PKL-----WFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTR-VFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATS-----------------------------------------------------------------------------------------ALEVVILKTLHMFEVPF-LLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -351437 for 3108 contacts (-113.1/contact) +
2D Compatibility (PS) -37441 + (NN) -2053 + (LL) 3908
1D Compatibility (HY) -23600 + (ID) 2750
Total energy: -413373.0 ( -133.00 by residue)
QMean score : 0.245
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