Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARKQN-RNSKELGLVPLTDDTSHAGPPGPGRALLECDHLRSGVP--GGRRRKDWSCSLLVASLAGAFGSSFLYGYNLSVVNAPTPYIKAFYNESW--ERRHGRPIDPDTLTLLWSVTVSIFAIGGLVGTLIVKMIGKVLGRKHTLLANNGF----AISAALLMACSLQAGAFEMLIVGRFIMGIDGGVALSVLPMYLSEISPKEIRGSLGQVTAIFICIGVFTGQLLGLPELLGK-ESTWPYLFGVIV-----VPAVVQLLSLPFLPDSPRYLLLEKHNEAR-------AVKAFQTFLGKADVSQ-----EVEEVLAESRVQRSIRLVSVLELLRAPYVRWQVVTVIVTMACYQLCGLNAIWFYTNSIFGKAGI----------------PPAKIPYVT-----LSTGGIETLAAVFSGLVIEHLGRR---PLLIGGFGLMGLFFGTL------TITLTLQDHAPWVPYLSIVG----------------ILAIIASFCSGPGGIPFILTGEFFQQSQRPAAFIIAGTVNWLSNFAVG---LLFPFIQKSLDTYCFLVFATICITGAIYLYFVLP-------------------ETKNRTYAEISQAFSKRNKAYPPEEKID--------SAVTDGKINGRP---- |
| 4XVK Chain:A ((1-666)) | KKHFCDIRHLDDWAKSQLIEMLKQAA------ALVITVMYTDGSTQLGADQTPVSSVRGIVVLVKRQACGPVLEGF---VSDDPCIYIQIEHSAIWDQEQEAHQQFARNVLFQTMKCKCPVICFN---AKDFVRIVLQFFGNDGSWKHVADFIGLDPRIAAWLIDPSDATPSFEDLVEKYCEKSITVKVN-STYGNSSRNIVNQNVRENLKTLYRLTMDLCSKLKDY-GLWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTSALLGARLKELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSYPSTSEAVLNALRDLHPLPKI-ILEYRQVHKIKSTFVDGLL--ACMKKGSISSTWNQTGTVTGRLSAKHPNIQGISKHPIQITTPKKILTISPRAMFVSSKGHTFLAADFSQIELRILTHLSGDPELLKLDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAVVYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTARLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGRSWGHLVPLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274873 for 3752 contacts (-73.3/contact) +
2D Compatibility (PS) -54522 + (NN) -1393 + (LL) 184
1D Compatibility (HY) -14800 + (ID) 4600
Total energy: -350004.0 ( -93.28 by residue)
QMean score : 0.157
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