Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MAATASAGAGGIDGK-PRTSPKSVKFLFGG-LAGMGATVFVQP----LDLVKNRMQLSGEGAKTREYKTSFHALTS-----------ILKAEGLRG-IYTGLSAGLLRQAT-------YTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFC--------ASMISGLVTTAASMPVDIAKTRIQNMRMIDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRLFLSG----- |
| 3J6V Chain:E ((89-430)) | FFTKLTADELWKGALAETGAGARKGRGKRTKRKRRKDLNRGQIIGEGRRGFLWPGLNAPLMKSGAIQTITQRSKEEQEKVEADMVQQREEWDRKRKMKVKRERGWSGNSWGGISLGPPDPGPNGETYDDFDTRILEVRNVF--NMTAKEGRKRSVRVLVAVGNGRGAAGFAIGKATE-----------RADAFRKAKNRAVHYLHYIERYEDH-TIYHDISLTFKRTHIKMKKQPRGYGLRCHRAITTICRLIGIKDMYAKVSGSVNMLSLTRGLFQGLSRQETHQQLADKKSLHVVEFREECGP-----LPIVVASPQGALRKDPEPEDEV--PDIKLDWDDVKAVQGMKRSVWSGLKRAAT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36719 for 1999 contacts (-18.4/contact) +
2D Compatibility (PS) -30015 + (NN) 3538 + (LL) 1784
1D Compatibility (HY) 800 + (ID) 2800
Total energy: -63412.0 ( -31.72 by residue)
QMean score : 0.012
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