Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQIQASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPA--SGMYFMTYEWLKN-----IFTPEGKRVSELSAPRILVAG--GIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPNL |
3WX4 Chain:A ((1-98)) | ------------------------------------------------------------------------------------------------------------------------------------------MIIDSQSVVQYTFKIDILEKLYKF--LPNLYHSIVNELVEELHLENNDFLIGTYKDLSKAGYFYVIPAPGKNIDDVLKTIMIYVHDYEIEDYFELEHHHH------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -35668 for 472 contacts (-75.6/contact) +
2D Compatibility (PS) -9105 + (NN) -353 + (LL) 11524
1D Compatibility (HY) -9600 + (ID) 900
Total energy: -44102.0 ( -93.44 by residue)
QMean score : 0.228
|
|
|