Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTKGGQTWARRALLLGILWATAHLPLSGTSLPQRLPRATGNSTQCVISPSSEFPEGFFTRQERRDGGIIIYFLIIVYMFMAISIVCDEYFLPSLEIISESLGLSQDVAGTTFMAAGSSAPELVTAFLGVFITKGDIGISTILGSAIYNLLGI--CAACGLLSNTVSTLSCWPLFRDCAAYTISAAAVLGIIYDNQVYWYEGALLLLIYGLYVLVLCFDIKINQYIIKKCSPCCACLAKAMERSEQQPLMGWEDEGQPFIRRQSRTDSGIFYEDSGYSQLSISLHGLSQVSEDPPSVFNMPEADLKRIFWVLSLPIITLLFLTTPDCRKKFWKNYFVITFFMSAIWISAFTYILV--WMV---TITGETLEIP-DTVMGLTLLAAGTSIPDTIASVLVARKGKGDMAMSNIVGSNVFDMLCLGIPWFIKTAFINGSAPAEVNSRGLTYITISLNISIIFLFLAVHFNGWKLDRKLGIVCLLSYLGLATLSVLYELGIIGNNKIRGCGG- |
| 4UZ1 Chain:A ((9-375)) | ----------NEDLRLHLLLNT--------------------SVTC----NDGSPAGYYLKESRGSRRWLLFLEGGWYCFN--RENCDSRYDTMRRLMS-SRDWPRTRTGTGIL---SSQPEENPYWWNA------------------NMVFIPYCSSDVWSGASSKSEKNEYAF-------MGALIIQEVVRELLGRGLSGAKVLLLAGS-------------------SAGGTGVLLNVDRVAEQ----LEKLGYPAIQVRGLADSGWFLDNKQYRH-----------TDCVDTITCAPTEAIRRGIRYWNGVV-------PERCRRQFQEGEEWNCFFGYKVYPTLRSPVFVVQWLFDEAQLTVDNVHLPVQEGLRLYIQNLGRELRHTLKDVPA-----------------SFAPACLSHEIIIRSHWTDVQVKGTSLPRALHCWDRSLHKTPL-----KGCPVHLVDSCPWPHCNPS-----------------------CPTG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -353308 for 3046 contacts (-116.0/contact) +
2D Compatibility (PS) -34951 + (NN) 4750 + (LL) 10268
1D Compatibility (HY) -10000 + (ID) 3500
Total energy: -386741.0 ( -126.97 by residue)
QMean score : 0.139
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