Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVITPLLLLLFLGSSSSVPFTSIFSQLFMTVVVPLIIGQIVRRYIKDWLERKKPPFGAISSSVLLMIIYTTFCDTFSNPNIDLDKFSLVLILFIIFSIQLSFMLLTFIFSTRNNSGFTPADTVAIIFCSTHKSLTLGIPMLKIVFAGHEHLSLISVPLLIYHPAQILLGSVLVPTIKSWMVSRQKKLLQTRGPLANLNNPEGLEYLSIKFGH |
3TJZ Chain:B ((20-311)) | ----QHLEKSAVLQEARV------------FNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMT-KLFQS--NDPTLRRMCYLTIKEMS---------CIAEDVIIVTSSLTKDMTGKEDSYRGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLL--------KCSFDVVKRWVNEAQEA---ASSD----------------------------------NIMVQYHALGLLYHVRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASRQS----------CLRNKHEMVVYEAASAIVNA--VSVLQLFCSSPKA--------ALRYAAVRTL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213533 for 2040 contacts (-104.7/contact) +
2D Compatibility (PS) -26699 + (NN) 3733 + (LL) 8468
1D Compatibility (HY) -10400 + (ID) 1900
Total energy: -240331.0 ( -117.81 by residue)
QMean score : 0.286
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