Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MGMSKS---HSFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFIS-----WDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVHVVLSLIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQRNRFFSIFYLAINAGSLLSTIITPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCIGFAIKNRFRHRSKAFPKREHWLDWAKEKYDERLISQIKMVTRVMFLYIPLPMFWALFDQQGSRWTLQATTMSGKIGALEIQPDQMQTVNAILIVIMVPIFDAVLYPLIAKCGFNFTSLKKMAVGMVLASMAFVVAAIVQVEIDKTLPVFPKGNEVQIKVLNIGNNTMNISLPGEMVTLGPMSQTNAFMTFDVNKLTRINISSPGSPVTAVTDDFKQGQRHTLLVWAPNHYQVVKDGLNQKPEKGENGIRFVNTFNELITITMSGKVYANISSYNASTYQFFPSGIKGFTISSTEIPPQCQPNFNTFYLEFGSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQYFLLTCGEVVFSVTGLEFSYSQAPSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFSKQWAEYILFAALLLVVCVIFAIMARFYTYINPAEIEAQFDEDEKKNRLEKSNPYFMSGANSQKQM |
4IKW Chain:A ((3-494)) | SIDKQQIAASVPQRGFFGHPKGLFTLFFTEFWERFSYYGMRAILVYYMYYEVSKGGLGLDEHLALAIMSIYGALVYMSGIIGGWLADRVFGTSRAVFYGGLLIMAGHIALAI------------------PGGVAALFVSMALIVLGTGLLKPNVSSIVGDMYKPG-DDRRDAGFSIFYMGINLGAFLAPLVVGTAGMK----------YNFHLGFGLAAVGMFLGLVVFVATRKKNLGLAGT------------------YVPNPLT--------PAEKKKAAAIMAVGAVVIAVLLAILIPNGW-------------------------FTVETFISLVGILGIIIPIIYFVVMYR-----SPKTTAEERSRVIAYIPLFVASAMFWAIQEQGSTILANYADKRTQLDVAGIHLS------PAWFQSLNPLFIIILAPVFAWMWVKL-------------------GKRQP-----------------TIPQKFALGLLFAGLS--FIVILVPGHLSGG-------------------------------------------------------------------GLVHPIWLVLSYFIVVLGELCLSPVGLSATTKLAPAAFSAQTMSLWFLSNAAAQAINAQLVRFYTPENETAYFGTIGGAALVLGLILLAIAPRIGRL-------------------------MKG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -339495 for 4109 contacts (-82.6/contact) +
2D Compatibility (PS) -48749 + (NN) -4730 + (LL) 12904
1D Compatibility (HY) -31200 + (ID) 6150
Total energy: -417420.0 ( -101.59 by residue)
QMean score : 0.143
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