Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MSSESKEQHNVSPRDSAEGNDSYPS-GIHLELQRESSTDFKQFETNDQCRP-------------YHRILIERQEKSDTNFK-----------------EFVIKKLQKNCQCSP----------AKAKNMILGFLPVLQ--WLPKYDLKKNILGDVMSG-----LIVGILLVPQ---SIAYSLLAGQEPVYGLYTS-------------FFASIIYFLLGTSRHISVGI---FGVLCLMIGET------VDRELQKAGYDNAHSAPSLGMVSNGSTLLNHTSDRICDKSCYAIMVGSTVTFIAGVYQVAMGFFQ------------------VGFVSVYLSDALLSGFVTGASFTILT----------SQAKYLLGLNLPRTNGVGSLITTWIHV------------FRNIHKTNLCDLITSLLCLLVLLP---TKELNEHFKSKLKAPIP----IELVVV---------VAATLASHFGKLHENYNSSIAGHIPTGFMPPKVPEWNLIPSVAVDAIAISIIGFAITVSLSEMFAKKHGYTVK----ANQEMYAIGFCNII----PSFFHCFTTSAA--LAKTLVKESTGCHTQLSGVVTALVLLL---------------------------VLLVIAPLFYSLQKSVLGVITIVNLRGALRKFRDLPKMWSISRMDTVIWFVTMLSS------ALLSTEIGLLVG-----VCFSIFCVILRTQKPKSSLLGLVEESEVFESVSAYKNLQI---KPGIKIFRFVA-----------------------PLYYINKECFKSALYKQT---------VNPILIKVAWKKAAKRKIKEKVVTLGGIQDE---MSVQLSHDPLELHTIVIDCSAIQFLDTAGIHTLKEVRRDYEAIGIQVLLAQCNPTVR--DSLTNGEYCKKEEENLLFYSVYEAMAFAEVSKNQKGVCVPNGLSLSSD-------------------------------------- |
| 3B8E Chain:A ((1-998)) | AKKERDMDELKKEVSMDDHKLSLDELHRKYGTDLSRGLTPARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDK--TGTLTQNRMTVAHMWSDNQIHEADTTENQSGVSFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKEMRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPERILDRCSSILIHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHLFLPDEQFPEGFQFDTDDVNFPLDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMV---TGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPASKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNEQLISMAYGQIGMIQALGGFFTYFVILAENGFLPIHLLGLRVNWDDRWINDVEDSYGQQWTYEQRKIVEFTCHTPFFVTIVVVQWADLVICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEVRKLIIRRRPGGWVEKETYY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -382544 for 5547 contacts (-69.0/contact) +
2D Compatibility (PS) -75651 + (NN) 1065 + (LL) 696
1D Compatibility (HY) -22000 + (ID) 5050
Total energy: -483484.0 ( -87.16 by residue)
QMean score : 0.192
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