Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEPFGNQYIVARPV----YSTNAFEENHKKTGRHHKTFLDHLKVCCSCSPQKAKRIVLSLFPIASWLPAYRLKEWLLSDIVSGISTGIVAVLQGLAFALLVDIPPVYGLYASFFPAIIYLFFGTSRHISVGPFPILSMMVGLAVSGAVSKAVPDRNATTLGLPNNSNNSSLLDDERVRVAAAASVTVLSGIIQLAFGILRIGFVVIYLSESLISGFTTAAAVHVLVSQLKFIFQLTVPSHTDPVSIFKVLYSVFSQIEKTNIADLVTALIVLLVVSIVKEINQRFKDKLPVPIPIEFIMTVIAAGVSYGCDFKNRFKVAVVGDMNPGFQPPITPDVETFQNTVGDCFGIAMVAFAVAFSVASVYSLKYDYPLDGNQELIALGLGNIVCGVFRGFAGSTALSRSAVQESTGGKTQIAGLIGAIIVLIVVLAIGFLLAPLQKSVLAALALGNLKGMLMQFAEIGRLWRKDKYDCLIWIMTFIFTIVLGLGLGLAASVAFQLLTIVFRTQFPKCSTL--ANIGRTNIYKNKKDYYDMYEPEGVKIFRCPSPIYFANIGFFRRKLIDAVGFSPLRILRKRNKALRKIRKLQKQGLLQVTPKGFICTVDTIKDSDEELDNNQIEVLDQPINTTDLPFHIDWNDDLPLNIEVPKISLHSLILDFSAVSFLDVSSVRGLKSILQEFIRIKVDVYIVGTDDDFIEKLNRYEFFDGEVKSSIFFLTIHDAVLHILMKKDYSTSKFNPSQEKDGKIDFTINTNGGLRNRVYEVPVETKF |
4LLG Chain:F ((6-612)) | ---QSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMGR---TTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAE------------YPEAITYLLEQYDRVEAEEARLSDLITGFVDDPELAREKFAELRAQYVVTRDTIKATAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMK-------------------LCVEQCKMPKKNF---ITLFTGNETSD----------------------------------TWFNAAIAMN---------------------------KPWSEKLHD----------VSEEVHRALQKLQQIEEE---------------------------------------TGLT------IEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMG----REPTPEELAE-----------------RMLMPEDK-IRKVLKIAKEPISMETPIG----------------DDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVL-------------------AGLTAREAKVLRMRFGI-------DMNTDYTLEEVGKQFDVTRERIRQIEAKALRKLR---------HPSRSEVLRSFLD-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LLG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250955 for 3302 contacts (-76.0/contact) +
2D Compatibility (PS) -52641 + (NN) -9759 + (LL) 18148
1D Compatibility (HY) -6800 + (ID) 3850
Total energy: -305857.0 ( -92.63 by residue)
QMean score : 0.187
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