Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKTNKIIFIVFIVIFIGLSYRHFTNTDKARMEISSLSSIDVFKFNSFSKFSNDKIGVIYDEE--KLSKFKVIMNSLDTSEGIKKIEVPKDANIESFKYSYHIQPNLKYVEDNNVYDGYFLLYILVGDSEGKSYIIFSGTELSYVLDKNNTNILKEIFLNVKKQQ |
3KVC Chain:A ((487-522)) | -------------------------------------------------------LSVVVSPGAGQKPAYLLILNAKDLSE-VARAEVEINI------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KVC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 905 for 164 contacts (5.5/contact) +
2D Compatibility (PS) -3706 + (NN) -892 + (LL) 8700
1D Compatibility (HY) -2800 + (ID) 400
Total energy: 1807.0 ( 11.02 by residue)
QMean score : 0.075
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