Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRILSLLGVIALFLGVILVSCGNDDDNKNTTGVHKIVVEQSGNTDDFDLNIAFGAANTGGVAKLYN-ENGEYLGDSY--LVNKVTENKISCQTGKEGSMMTCAGSVIST-SEQAGKKLKISVIAYIDNKEVNRLEKEYITKGSTLVENFSVSTTSVE
2LG7 Chain:A ((1-107))
-----------------------GDDDEPGGKGAMYEVTIEQSGDFRSFIKSVVVVANG----TQLKDGATGESLASPVILSDEELAVEKVTLSTTGKAIEFAVSGGVVDGEDGVVNEPMQWVVTVYKNGKEIE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LG7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21053 for 594 contacts (-35.4/contact) +
2D Compatibility (PS) -11528 + (NN) -6938 + (LL) 4356
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -41013.0 ( -69.05 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_2LG7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LG7-query.scw
PDB file :
Tito_Scwrl_2LG7.pdb
: