Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | QDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAAD--QGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNTTFG-SFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVNFLASNIHYPSK---KMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYASSIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSG |
| 2DYU Chain:A ((31-299)) | ------------------------------DIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTA---------KWLSEEF-LLDV-------PGKETELYAKACKEAKVYGVFSIMERNP----D----SNKN-PYNTAIIIDPQGEIILKYRKLFPWN-PIEPWYPGDLGMPVCEGPGGSKLAVCICHDGMIPELAREAA-YKGCNVYIRISGYSTQVND-QWILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQICNFDGTTLVQ--GHRNPWEIVTGEIYPKM-----AD---NAR--LSWGLEN---------NIYN----LGHRGYVAKPGGEHDAGLTYI--------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -123817 for 2160 contacts (-57.3/contact) +
2D Compatibility (PS) -27862 + (NN) -12791 + (LL) 11912
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -162008.0 ( -75.00 by residue)
QMean score : 0.217
|
|
|