Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GALTTSTRQGSRVVGFMDFIIALGWQIIPSNIRYIYILNCSQFMPTSDVTTIYFQADSGLESIFVMDSPFYASCTQQLPDKTIKTYGVTISKKQSIISINFSSSLEPNIMVSAWTASITRTQ
3SB2 Chain:A ((36-71))
-----------HVESFDQYVVLLR----NTVTQMVYKHAISTVVPARAVNL-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3SB2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29618 for 148 contacts (-200.1/contact) +
2D Compatibility (PS) -3702 + (NN) -131 + (LL) 5968
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -31033.0 ( -209.68 by residue)
QMean score : 0.088
(partial model without unconserved sides chains):
PDB file :
Tito_3SB2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SB2-query.scw
PDB file :
Tito_Scwrl_3SB2.pdb
: