Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------------------------------------------------------------------------SNINKAKVAS---VESDYSSIKSAALSYYSDTNK---IPVTPDGQTGLNVLETYMESLP-DKADIGGEYKLI-KVGNKLVLQIGKDGEGVTLTEAQSAKLLSDIGKDKIYTGVTGDNFGEQLKDTTKIDNKALYIVLIDNTV-MDSTK-------------------------------- |
1DKR Chain:A ((9-317)) | NLKIFSLNSNPELAKEIADIVGVQLGKCSVTRFSDGEVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKSREPITAKLFANLLETAGATRVIALDLHAPQIQGFFDIPIDHLMGVPILGEYFEGKNLEDIVIVSPD-HGGVTRARKLADRLKAPIAIIDKRMNIVGNIEGKTAILI-DDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVER--INNSTIKELVVTNSIKLPEEKKIERFKQLSVGPLLAEAIIRVHEQQSVSYLFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11301 for 1020 contacts (-11.1/contact) +
2D Compatibility (PS) -14689 + (NN) -6172 + (LL) -228
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -39140.0 ( -38.37 by residue)
QMean score : 0.388
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