Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD-----KTVKLWNRN-G-----------QLLQTLTGHSSS--VWGVAFSPDGQTIASASDDKTVKLWNR-N-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH
3ZWL Chain:B ((11-236))
-RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET-
General information:
TITO was launched using:
RESULT:
Template:
3ZWL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47456 for 1586 contacts (-29.9/contact) +
2D Compatibility (PS) -22141 + (NN) -17130 + (LL) -156
1D Compatibility (HY) -13200 + (ID) 2350
Total energy: -102433.0 ( -64.59 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_3ZWL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZWL-query.scw
PDB file :
Tito_Scwrl_3ZWL.pdb
: