Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFIL-YQRAD-NGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLV-KTDNALAQRTRETIFATIDVIYKDFNFKQTRGEK-EGVAVPEWLP---HTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDTSSPVNGAFLSWQNLWHGYGNS-Q-AYALLVAGNRLGD--RDMIKAAFNELDHFHPWLI-SNGLLNEFTVRQQGEKVTLIEQKKFSQIAYIIRPMVF---ANIKAWEISRDAVYLERAVDLS-LWFFKNNPAQAQMYYPVTGIAFDGIDSATT-VN-----KNS----GAESTIEALLTLQLIESIPDAKRMLESALEKRNIKQ |
| 1FP3 Chain:A ((18-326)) | --------------------------------------------------------------------------------------------ELDRVMAFWLEHSHDREHGGFFTCLGRDGRVYD----DLKY-VWLQGRQVWMYCRLYRKLERFHRPELLDAAKA----GGEFLLRHARVAPPEKKCAFVL-TRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSG-LGRPQLPGAVASESMAVPMMLLCLVEQLGEEDEELAGRYAQLGHWCARRILQHVQRDGQAVLENV--SEDGEELS----GCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPF------RSGWDADHGGLFYFQDA-DGLCPTQLEWAMKLWWPHSEAMIAFLMG------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101293 for 2145 contacts (-47.2/contact) +
2D Compatibility (PS) -30197 + (NN) -15291 + (LL) 11568
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: -141263.0 ( -65.86 by residue)
QMean score : 0.220
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