Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHMVAMQSTIPSLTREEIADRMQHNPLVQAYQQEVMHWCKIVYGNSDVLKEKMQEVL-QKPSEGEDLSRQVAENPTSVHKLAGRNLCGLKTNARRQAEEGFMHLCQALDGYTSAVTQAQENIKHVPQAEARRYGQESEQRA
1OQY Chain:A ((232-282))
------------------------LEFLRDQPQF-------QNMRQVIQQNPALLPALLQQLGQENPQ----LLQQISRHQEQFIQ-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1OQY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16723 for 304 contacts (-55.0/contact) +
2D Compatibility (PS) -5146 + (NN) -1599 + (LL) 7604
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -19014.0 ( -62.55 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_1OQY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OQY-query.scw
PDB file :
Tito_Scwrl_1OQY.pdb
: