Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLYTTLLIACLAAGFTACNDDDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIHS-NGKFYLLVGTSTSNRDHFYIVDAKTLYYE-NSAVVGANLSGLTILNEQYGLVTG--DGIRRIDLKSLNNVRIKN-ERLLCFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDIIQKQKINFVLAKDGNVYTLESADNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVST-DGAIYKYILGDSDSLKAPFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKDGKVLHTVDCGESVPSQILFNN |
| 1RWI Chain:B ((26-264)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------PSGVAVDSAGNVYVTSEG---MYGRVVKLAT-----TVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVAD--RGNNRVVKLAAGSKTQTVL--------PFTGLNDPDGVAVDNSGNVYVTDTD--NNRVVKLEAESNNQVVLP-FT------DITAPWGIAVDEA-GTVYVTEHNTNQVVKLLAGSTTSTVLPF----TGLNTPLAVAVDS-DRTVYVADR----GNDRVVKLTSLE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RWI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87244 for 1916 contacts (-45.5/contact) +
2D Compatibility (PS) -25125 + (NN) -9856 + (LL) 10904
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -116921.0 ( -61.02 by residue)
QMean score : 0.180
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