Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTG-KDPLNVDSMDFTLYQGDTKMSD-----------TDPEDYSEKLQGSTINAD------KSVEGNLFFVVDKGKQYELNYT---PESYGDKKPKS---VTFKI--DGKDKKILATADKLQDSAKALSAYVDVLLFGKDNADFEKITGANKNEIVNDFNESAKDGYLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATVKPVDASSLSDRIEDKVKDYYSKNSSASYEEAVKY-----ALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE---
1NA6 Chain:A ((4-398))SVFHNWLLEIACENYFVYIKRLSANDTGATQVGLYIPSGIVEKL------FPSINHTRELNPSVFLTAHVSSHDCPDSEARAIYYN--SAHFGKTRNEKRITRWG---RGSPLQDPENTGALTLLAFKLDEQGGDCKEVNIWVCASTDEEDVIETAIGEVIPGALISGPAGQILGGL-----SLQQAPVNHKYILPEDWHLRFPSGSEIIQYAASHYDPDEQLLDRRRVEYDIFLLVEELH-------VLDIIRK--GFGSVDEFIALANSVSNRRKSRAGKSLELHLEHLFIEH--GLRHFATQAPDFL--FPSAGAYHPLRMLAVK----TTCKDRWRQILNHLFTLQEGVSLAQYREMRESGVRLVVPSSLHKKYPEAVRAELMT-----------------------LGAFIAELTG


General information:
TITO was launched using:
RESULT:

Template: 1NA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 111158 for 1986 contacts (56.0/contact) +
2D Compatibility (PS) -31124 + (NN) -5425 + (LL) 5348
1D Compatibility (HY) -7600 + (ID) 2550
Total energy: 69807.0 ( 35.15 by residue)
QMean score : 0.185

(partial model without unconserved sides chains):
PDB file : Tito_1NA6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NA6-query.scw
PDB file : Tito_Scwrl_1NA6.pdb: