Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGELPGSEGMWE----NCPLGWVKKKASGTLAPLDFLLQRKRLWLWASEPVRPQPQGIHRFREARRQFCRMRGSRLTGGRKGFGSSGLRFGRGGFSEEVMPQPVLKAMRCAEGAWWFSPDGPAGSAASIWPAEGAEGLPGQLGRDRLEVVYSVPDNVPGQNGSRRPLVCKITGKCLSVCSEENAKAGGCSAFPLLLSQLGARMTGREHAHKGPELTTPDSGLPRPPNPALAGFRALAQHSPPLGTSTPSAVLLSAAT--- |
3KM5 Chain:A ((1-178)) | -GSADFTETFESSTHGEAPAEWTTIDADGD----------GQGWLCLSSGQLDWLTA--------------------HGGSNVVSSFSWNGMALNPDNYLISKDVTGATKVKYYYAVNDGFPG---------------------DHYAVMISKTGT-----------------------NAGDFTVVFEETPNGINKGGARFGLSTEANGAKPQSVWIERTVDLPAGTKYVAFRHY-------NCSDLNYILLDDIQFTM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21768 for 1374 contacts (15.8/contact) +
2D Compatibility (PS) -17979 + (NN) -7104 + (LL) 4628
1D Compatibility (HY) -400 + (ID) 1250
Total energy: -337.0 ( -0.25 by residue)
QMean score : 0.196
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